PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MELO3C014053P1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
Family ERF
Protein Properties Length: 170aa    MW: 18619.7 Da    PI: 6.7915
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MELO3C014053P1genomeMELONOMICSView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP250.36.1e-161159255
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    +ykG+r ++  g+Wv+eIr+p++   + r++lg++ t+e+Aa+a++ a+++l+g
  MELO3C014053P1 11 HYKGIR-CR-GGKWVSEIREPRK---TNRIWLGTYPTPEMAAAAYDVAALALKG 59
                    69***9.55.7*********854...49***********************987 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541711.9E-181169IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.104.6E-261169IPR001471AP2/ERF domain
SMARTSM003802.1E-271173IPR001471AP2/ERF domain
PROSITE profilePS5103219.4671167IPR001471AP2/ERF domain
CDDcd000182.08E-151169No hitNo description
PfamPF008471.4E-91159IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 170 aa     Download sequence    Send to blast
MASTSSKRHD HYKGIRCRGG KWVSEIREPR KTNRIWLGTY PTPEMAAAAY DVAALALKGC  60
NAVLNFPDSV ASYPVPASTS PNDIRIAAAA AAASKRVDDQ GENNYHNSHY QSPPANEFVD  120
EEALFGMPNL LLDMAEGMLL SPPRMNSSPS RHDYYSWNSS GDGNLWSYH*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankLN6818600.0LN681860.1 Cucumis melo genomic scaffold, anchoredscaffold00021.
GenBankLN7132600.0LN713260.1 Cucumis melo genomic chromosome, chr_6.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008448976.11e-124PREDICTED: ethylene-responsive transcription factor ERF026-like
SwissprotQ9FJ902e-48ERF25_ARATH; Ethylene-responsive transcription factor ERF025
TrEMBLA0A0A0L5V91e-82A0A0A0L5V9_CUCSA; Uncharacterized protein
STRINGPOPTR_0003s12120.12e-62(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF56232144
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52020.18e-46ERF family protein